Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCACTGTCACCCAGGCTAGAGTGCAGTGCCGTGATCTCGGCTGCAAC
(((((((((((((((((((((&))))))))........................)))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199957
GeneSymbolNDUFB5
Binding site1218,1270
Score0.846
Seed1
Au0.397
Energy-21.5
Binding len52
Me-3.938
Phylopstem-0.082896137254902
Phylopflank0.11008114500000002
Longest consecutive pairings8
Position of longest consecutive pairings44
Pairings in 3prime end8
Position3UTR
2D Structure