Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCTAGCCAGCAGCTGA
...((((((((((((..(((.&)))..))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199974
GeneSymbolRPL36A-HNRNPH2
Binding site1493,1512
Score0.846
Seed0
Au0.471
Energy-21.8
Binding len19
Me-6.748
Phylopstem1.6994651307692306
Phylopflank2.950762243749999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure