Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTACACAAAGCATGGCACCAGCAGCTGCT
..((((((((((.(((...((&.))...))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199981
GeneSymbolNDUFS1
Binding site6199,6231
Score0.846
Seed1
Au0.471
Energy-21.8
Binding len21
Me-6.246
Phylopstem-0.06210376363636363
Phylopflank0.35913266499999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure