Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGGAACGACCGTCCTCCAAGTTGTAGCTGCT
..((((((((((((((..(((&)))....))))))))............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199981
GeneSymbolNDUFS1
Binding site239,273
Score0.923
Seed1
Au0.456
Energy-21.5
Binding len34
Me-4.957
Phylopstem0.16474543076923073
Phylopflank0.18530777475
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end6
PositionCDS
2D Structure