Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCACCGCAAGGTCTCGGTGCAGTACTGCGACGTGCTGCAC
.(((((((((((.(((.((((&)))))))))))).........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199989
GeneSymbolRASD1
Binding site750,794
Score0.846
Seed1
Au0.397
Energy-21.3
Binding len44
Me-5.082
Phylopstem5.369127380555556
Phylopflank2.579374264999999
Longest consecutive pairings12
Position of longest consecutive pairings32
Pairings in 3prime end7
Position3UTR
2D Structure