Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGCCCCGCCGCGCTGCGC
.((((((.(((((.((.(((.&))).))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001200
GeneSymbolBMP2
Binding site29,50
Score0.846
Seed1
Au0.176
Energy-22.3
Binding len21
Me-6.964
Phylopstem0.2537295
Phylopflank0.46905423356060605
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure