Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGGGGCTTCCGCAAGCTGCAT
.(((((((((((..((..(((&)))....))..))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001200016
GeneSymbolNAA80
Binding site897,921
Score0.923
Seed1
Au0.382
Energy-24.1
Binding len24
Me-5.939
Phylopstem0.9888233333333334
Phylopflank1.2347543599999995
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure