Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAGGTCTTTGCTCGGGCCCGGGGCTTCCGCAAGCTGCAT
.(((((((((((..((..(((&.)))....))..))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001200018
GeneSymbolNAA80
Binding site579,623
Score0.923
Seed1
Au0.382
Energy-24.5
Binding len25
Me-5.939
Phylopstem4.21519555
Phylopflank3.1092113975
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure