Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCCCTGTGACGTCTCCTCAGGGCAGCTGGAC
.(.((((((((((((.(((((&))))))))))..................))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001200019
GeneSymbolOPRL1
Binding site2018,2056
Score0.846
Seed0
Au0.353
Energy-22.6
Binding len38
Me-5.584
Phylopstem-0.35792976666666676
Phylopflank-0.2879247175000001
Longest consecutive pairings10
Position of longest consecutive pairings28
Pairings in 3prime end7
Position3UTR
2D Structure