Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAAGGGCCGGAAGCAGCTGCGAC
((((((((((((((.(.((((&))))..).))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001200049
GeneSymbolCFAP46
Binding site3081,3108
Score0.923
Seed1
Au0.382
Energy-25.1
Binding len27
Me-4.673
Phylopstem-0.8620937222222224
Phylopflank0.5690473612499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure