Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGCCGCTGAGCGTGGGCTGTG
..((((((((((((((.((((&))))))))))))........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001200049
GeneSymbolCFAP46
Binding site5904,5931
Score0.923
Seed1
Au0.265
Energy-24.6
Binding len27
Me-4.957
Phylopstem1.551454545454546
Phylopflank1.6108000000000002
Longest consecutive pairings12
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure