Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGTTTATCGACTGTGGCTGCAAA
(((((((((((((((((((.(&).)))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001200049
GeneSymbolCFAP46
Binding site5394,5417
Score1.0
Seed1
Au0.603
Energy-24.3
Binding len23
Me-3.938
Phylopstem2.0119328039999997
Phylopflank2.2406218294999993
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure