Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTGGCAACAGCTGTAT
.((((((((..((((.((((.&))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001200050
GeneSymbolNPL
Binding site223,242
Score0.846
Seed1
Au0.5
Energy-19.3
Binding len19
Me-8.094
Phylopstem0.08754087500000002
Phylopflank-0.17245068125000002
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
Position5UTR
2D Structure