Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCTGCCGCCCCTGCC
..((((..(((((.(((....&))).)))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001200051
GeneSymbolNPL
Binding site499,515
Score0.923
Seed0
Au0.529
Energy-17.4
Binding len16
Me-9.671
Phylopstem2.151504
Phylopflank2.743789313
Longest consecutive pairings5
Position of longest consecutive pairings7
Pairings in 3prime end3
PositionCDS
2D Structure