Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCTGAAAACAAAGGAAGGTGCTGGTC
.((((((.(((((((((((((.&))))))........))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001358351
GeneSymbolSEMA6D
Binding site3653,3682
Score1.0
Seed1
Au0.618
Energy-20.9
Binding len29
Me-6.107
Phylopstem2.5205817142857145
Phylopflank2.37398925625
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure