Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAACAGGCAGCTGTAT
.(((((((((.(((.(.((((&))))).)))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001200054
GeneSymbolPMEL
Binding site177,198
Score0.821
Seed1
Au0.471
Energy-22.2
Binding len21
Me-7.354
Phylopstem0.33079048888888885
Phylopflank1.0545025275
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure