Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTACAGGCGGCTATTGCAGA
((((((((((..((((((((.&))))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201325
GeneSymbolPDZK1
Binding site1777,1799
Score0.923
Seed1
Au0.603
Energy-18.5
Binding len22
Me-10.109
Phylopstem2.148741076923077
Phylopflank2.7701100024999996
Longest consecutive pairings14
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure