Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAGCACCAAAGATGATTCATAACTCTGTATAGGTGACAGCTGCT
..(((((((((.(((((((((&.)).)).))))).)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201325
GeneSymbolPDZK1
Binding site1928,1976
Score0.846
Seed1
Au0.632
Energy-19.0
Binding len24
Me-8.304
Phylopstem3.178132090909091
Phylopflank2.6713408183749996
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure