Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTACAGGCGGCTATTGCAGA
((((((((((..((((((((.&))))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201326
GeneSymbolPDZK1
Binding site1476,1498
Score0.846
Seed1
Au0.603
Energy-18.5
Binding len22
Me-10.109
Phylopstem1.2166344692307691
Phylopflank0.9189524700000001
Longest consecutive pairings14
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure