Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAAACTCTGCAGGCTGG
...(((((((((.....((((&)))).....)))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201326
GeneSymbolPDZK1
Binding site877,897
Score0.846
Seed0
Au0.544
Energy-17.0
Binding len20
Me-9.629
Phylopstem2.6869720999999998
Phylopflank2.83207596125
Longest consecutive pairings6
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure