Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCTGCTGCTGCTGCTGCAAG
(((((((.(((((.(((.(((&)))..))).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001358351
GeneSymbolSEMA6D
Binding site5,28
Score0.923
Seed1
Au0.404
Energy-23.1
Binding len23
Me-7.108
Phylopstem1.1129789285714284
Phylopflank1.1173953773749998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure