Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACAACCATGCAAAGTGCAGTGCT
..(((.((((((((((.((((&)))))))))).........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001358351
GeneSymbolSEMA6D
Binding site1652,1679
Score0.846
Seed0
Au0.559
Energy-19.4
Binding len27
Me-6.858
Phylopstem4.920400984210527
Phylopflank4.007598646249999
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure