Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGAGAGTGCAGCTGTGAT
(((((((((((.((.((((((&)))))).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201329
GeneSymbolPPP1R3B
Binding site5352,5374
Score1.0
Seed1
Au0.529
Energy-22.8
Binding len22
Me-8.02
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure