Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGTGCAGCTGCAGAAGAGAAATGGGATTGGCTCTTGTTTTCTGCAAG
(((((((((((((((((.((.&))..)))))))))))...........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201329
GeneSymbolPPP1R3B
Binding site1587,1636
Score0.846
Seed1
Au0.618
Energy-21.5
Binding len49
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings34
Pairings in 3prime end6
Position3UTR
2D Structure