Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGATGGCCGCTGGAACGATGACTTCTGCCTGCAGG
((((((((((((((((..(((&)))..)))))))).))...............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201352
GeneSymbolASGR2
Binding site1108,1146
Score0.846
Seed1
Au0.382
Energy-19.2
Binding len38
Me-3.938
Phylopstem0.579167
Phylopflank0.42711833374999997
Longest consecutive pairings8
Position of longest consecutive pairings25
Pairings in 3prime end6
PositionCDS
2D Structure