Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCGCGTGAGCAGCTGCAGA
((((((((((...((((.(((&))).)))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201363
GeneSymbolHMGN3
Binding site21,45
Score1.0
Seed1
Au0.265
Energy-23.3
Binding len24
Me-11.398
Phylopstem2.8643734000000003
Phylopflank3.2997228416666666
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure