Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCCGGCCGTGCTGCC
..(((((.(((((((...(((&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201365
GeneSymbolRNF14
Binding site1167,1185
Score0.846
Seed0
Au0.353
Energy-20.6
Binding len18
Me-7.504
Phylopstem4.839976428571428
Phylopflank4.7627181575
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure