Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGAAGAACTGCAGGAGCTGCGGG
((((((((((((((.(..((.&))..).)))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201372
GeneSymbolCCDC136
Binding site837,861
Score0.846
Seed1
Au0.485
Energy-21.1
Binding len24
Me-4.673
Phylopstem1.9759874117647058
Phylopflank2.44416436625
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end4
PositionCDS
2D Structure