Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGTGGCTGTC
..((((((((((((((.....&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201380
GeneSymbolCNTNAP3B
Binding site4272,4287
Score1.0
Seed1
Au0.485
Energy-21.7
Binding len15
Me-4.957
Phylopstem2.3403287571428577
Phylopflank2.22882511
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure