Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAGCAGCCCAGACTGCAT
.((((((((.((((((((((.&))))).)))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001358406
GeneSymbolCCDC163
Binding site1892,1913
Score0.923
Seed1
Au0.471
Energy-24.3
Binding len21
Me-5.036
Phylopstem-0.11502470909090907
Phylopflank-0.06683783375000002
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end7
Position3UTR
2D Structure