Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGGCGGCGGCAGTTGTC
..((((((((.(((((..(((&)))..))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001358406
GeneSymbolCCDC163
Binding site113,133
Score0.923
Seed1
Au0.382
Energy-22.3
Binding len20
Me-7.782
Phylopstem0.285035325
Phylopflank0.15685529275
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure