Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGAGGCCAGCCCAGCTGCT
..(((((((.(((((......&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201429
GeneSymbolCABIN1
Binding site2187,2210
Score0.923
Seed1
Au0.441
Energy-21.3
Binding len14
Me-6.433
Phylopstem4.9354642857142865
Phylopflank3.5770891625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure