Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGATTAAACTGTTTTGCTTAGTACTGGTTACAGCTGTAGCTGGAGA
((.((((((((((((((((((&.)))..))))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201482
GeneSymbolOSBPL6
Binding site6509,6558
Score0.808
Seed0
Au0.662
Energy-24.7
Binding len25
Me-5.495
Phylopstem-0.26465376
Phylopflank0.21059682600000001
Longest consecutive pairings15
Position of longest consecutive pairings4
Pairings in 3prime end8
Position3UTR
2D Structure