Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACCATAGCAGCTGCC
..(((((((((((((......&)))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201484
GeneSymbolPIGO
Binding site643,660
Score0.923
Seed1
Au0.353
Energy-21.2
Binding len17
Me-5.19
Phylopstem3.50607225
Phylopflank4.324527452500002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure