Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAAAGGCCAAGAGAAGACGCAGCCTACACCACAAGCAGCAGCTGGAGA
((.((((((((((((((((((&))))))))...))).............................))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201528
GeneSymbolPCSK2
Binding site466,520
Score0.827
Seed0
Au0.441
Energy-22.9
Binding len54
Me-5.495
Phylopstem3.018066697999999
Phylopflank3.5266322853749994
Longest consecutive pairings8
Position of longest consecutive pairings46
Pairings in 3prime end8
PositionCDS
2D Structure