Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTGGGACATCTGCAGCTGCC
..((((((((((.(((.....&.))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201529
GeneSymbolPCSK2
Binding site1301,1322
Score0.923
Seed1
Au0.397
Energy-22.9
Binding len16
Me-6.246
Phylopstem6.184303399999999
Phylopflank5.37076616
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure