Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAGGCTGAAGCAGGA
....(((((((((((((....&))))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001201536
GeneSymbolTAF1A
Binding site1859,1876
Score0.889
Seed0
Au0.471
Energy-22.4
Binding len17
Me-9.547
Phylopstem0.17261020624999995
Phylopflank-0.7230075437500002
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure