Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGCCGCGCGCTGCC
..(((((((((((.....(((&)))..)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201536
GeneSymbolTAF1A
Binding site57,75
Score0.846
Seed1
Au0.382
Energy-20.7
Binding len18
Me-6.782
Phylopstem-0.31138749999999993
Phylopflank-0.08761677499999995
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end3
Position5UTR
2D Structure