Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAACATGCATTATACCTTCTGCAT
.(((((.(((((((((((((.&))))))))).)))).........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201536
GeneSymbolTAF1A
Binding site618,647
Score0.846
Seed0
Au0.662
Energy-20.5
Binding len29
Me-5.337
Phylopstem4.274050992857143
Phylopflank2.2979998099999994
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end7
PositionCDS
2D Structure