Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAGGACACAGCTGA
...((((((..(((.((((((&)))))).))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201543
GeneSymbolFAM161A
Binding site1160,1178
Score0.923
Seed0
Au0.544
Energy-21.4
Binding len18
Me-11.317
Phylopstem0.71397105
Phylopflank0.555573925
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure