Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTGTTCAATATGCAGCAAGAATTTTGCAAGATCTGATCACCTAAAGCAGCATGCAAA
((((((((((..(((((((((&.)))))))))................))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001358438
GeneSymbolKLF18
Binding site3070,3131
Score0.846
Seed1
Au0.567
Energy-18.9
Binding len38
Me-10.109
Phylopstem-0.4329130272727273
Phylopflank-0.0747572987499999
Longest consecutive pairings9
Position of longest consecutive pairings28
Pairings in 3prime end8
PositionCDS
2D Structure