Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCGACTGGCCCAGTATCCAGGTCGAGGTTCTGCAGA
(((((((((((((((((((((&))))))))))))...)))................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201572
GeneSymbolSEC22C
Binding site266,307
Score0.846
Seed1
Au0.544
Energy-22.3
Binding len41
Me-3.938
Phylopstem0.28331102
Phylopflank0.014691080000000026
Longest consecutive pairings12
Position of longest consecutive pairings29
Pairings in 3prime end8
PositionCDS
2D Structure