Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGACTGCAGCAGCAAA
((((.(((((((((....(((&))).))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201575
GeneSymbolCTSV
Binding site847,866
Score0.846
Seed0
Au0.559
Energy-20.2
Binding len19
Me-9.025
Phylopstem0.09199344444444442
Phylopflank-0.14871798749999998
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure