Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAAGGCAATCAGGGCTGCAAT
((((((((..((((((.(((.&)))....))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201575
GeneSymbolCTSV
Binding site560,584
Score0.846
Seed1
Au0.426
Energy-20.2
Binding len24
Me-6.236
Phylopstem-0.008447024999999993
Phylopflank-0.25657025250000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure