Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCCGAGTAGCTGGGAT
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201575
GeneSymbolCTSV
Binding site1696,1722
Score0.846
Seed0
Au0.426
Energy-20.1
Binding len26
Me-5.728
Phylopstem0.11312439499999999
Phylopflank0.164293946375
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure