Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTGCAGCTGCT
..((((((((((((.......&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201576
GeneSymbolPLSCR3
Binding site572,585
Score1.0
Seed1
Au0.353
Energy-22.4
Binding len13
Me-5.925
Phylopstem0.29468625000000004
Phylopflank0.3852314574999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure