Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCTGGTGCTTGCTGCGAT
(((((((..((((((.(((((&)))))))))))......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201576
GeneSymbolPLSCR3
Binding site1515,1540
Score0.815
Seed1
Au0.426
Energy-22.2
Binding len25
Me-7.541
Phylopstem0.7826477857142855
Phylopflank0.16666250625
Longest consecutive pairings11
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure