Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCGACTGGCCCAGTATCCAGGTCGAGGTTCTGCAGA
(((((((((((((((((((((&))))))))))))...)))................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001201584
GeneSymbolSEC22C
Binding site269,310
Score0.923
Seed1
Au0.544
Energy-22.3
Binding len41
Me-3.938
Phylopstem0.31101967
Phylopflank-0.0014723624999999829
Longest consecutive pairings12
Position of longest consecutive pairings29
Pairings in 3prime end8
PositionCDS
2D Structure