Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGAGCAACGCACTGCTGCAGC
((((((((((.(((((..((.&))..))))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001202
GeneSymbolBMP4
Binding site297,319
Score0.923
Seed1
Au0.441
Energy-21.3
Binding len22
Me-6.762
Phylopstem5.2578044166666675
Phylopflank2.8360881462499994
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position5UTR
2D Structure