Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGCCAGCCAGCTGCC
..(((((((((((((...(((&))).))))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001202233
GeneSymbolNR4A1
Binding site1864,1884
Score0.923
Seed1
Au0.309
Energy-21.6
Binding len20
Me-5.19
Phylopstem1.7942771866666665
Phylopflank3.097593815
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure